Package: threeBrain 1.2.0.9000
threeBrain: Your Advanced 3D Brain Visualization
A fast, interactive cross-platform, and easy to share 'WebGL'-based 3D brain viewer that visualizes 'FreeSurfer' and/or 'AFNI/SUMA' surfaces. The viewer widget can be either standalone or embedded into 'R-shiny' applications. The standalone version only require a web browser with 'WebGL2' support (for example, 'Chrome', 'Firefox', 'Safari'), and can be inserted into any websites. The 'R-shiny' support allows the 3D viewer to be dynamically generated from reactive user inputs. Please check the publication by Wang, Magnotti, Zhang, and Beauchamp (2023, <doi:10.1523/ENEURO.0328-23.2023>) for electrode localization. This viewer has been fully adopted by 'RAVE' <https://openwetware.org/wiki/RAVE>, an interactive toolbox to analyze 'iEEG' data by Magnotti, Wang, and Beauchamp (2020, <doi:10.1016/j.neuroimage.2020.117341>). Please check 'citation("threeBrain")' for details.
Authors:
threeBrain_1.2.0.9000.tar.gz
threeBrain_1.2.0.9000.zip(r-4.5)threeBrain_1.2.0.9000.zip(r-4.4)threeBrain_1.2.0.9000.zip(r-4.3)
threeBrain_1.2.0.9000.tgz(r-4.4-any)threeBrain_1.2.0.9000.tgz(r-4.3-any)
threeBrain_1.2.0.9000.tar.gz(r-4.5-noble)threeBrain_1.2.0.9000.tar.gz(r-4.4-noble)
threeBrain_1.2.0.9000.tgz(r-4.4-emscripten)threeBrain_1.2.0.9000.tgz(r-4.3-emscripten)
threeBrain.pdf |threeBrain.html✨
threeBrain/json (API)
NEWS
# Install 'threeBrain' in R: |
install.packages('threeBrain', repos = c('https://dipterix.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/dipterix/threebrain/issues
Pkgdown:https://dipterix.org
brainecogelectroencephalographyieeglocalizationmri-brainneuroimagingtemplate-brains
Last updated 14 days agofrom:fa452b72b2. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 19 2024 |
R-4.5-win | OK | Nov 19 2024 |
R-4.5-linux | OK | Nov 19 2024 |
R-4.4-win | OK | Nov 19 2024 |
R-4.4-mac | OK | Nov 19 2024 |
R-4.3-win | OK | Nov 19 2024 |
R-4.3-mac | OK | Nov 19 2024 |
Exports:AbstractGeomadd_niftiadd_voxel_cubeavailable_templatesBlankGeombrain_proxybrain_setupcalculate_rotationcheck_freesurfer_pathconform_volumecreate_colormapcreate_groupcreate_voxel_cubecross_prodDataCubeGeomDataCubeGeom2default_template_directorydownload_N27download_template_subjectFreeGeomfreeserfer_colormapfreesurfer_brainfreesurfer_brain2freesurfer_lutgenerate_smooth_envelopegenerate_subcortical_surfacegeom_freemeshgeom_sphereGeomGroupget_ijk2rasimport_from_freesurferimport_fsimport_sumaLineSegmentsGeomlist_electrode_prototypesload_colormapload_prototypelocalization_modulemerge_brainnew_electrode_prototypeplot_slicesread_fs_ascread_fs_m3zread_gii2read_mgzread_volumeread.fs.annotread.fs.curvread.fs.labelread.fs.mghread.fs.morphread.fs.surfaceread.fs.transformread.fs.volumeread.fs.weightread.nifti1.dataread.nifti1.headerread.nifti2.dataread.nifti2.headerrenderBrainsave_brainsave_colormapseeg_prototypeset_default_templateSphereGeomSpriteGeomthreeBrainthreebrain_finalize_installationthreejs_brainthreejsBrainOutputTubeGeomvideo_contentvolume_to_surfwrite.fs.surfacewrite.nifti1write.nifti2
Dependencies:abindbase64encbitopsbslibcachemclicodetoolscommonmarkcrayoncurldigestdipsausdownloaderevaluatefastmapfontawesomefreesurferformatsfsfuturefuture.applygiftiglobalsgluehighrhtmltoolshtmlwidgetshttpuvjquerylibjsonliteknitrlaterlifecyclelistenvmagrittrmemoisemimeoro.niftiparallellypkgfilecachepngprogressrpromisesR.methodsS3R.ooR.utilsR6rappdirsRcpprlangrmarkdownRNiftirstudioapisassservrshinysourcetoolsstringistringrtinytexvctrswithrxfunxml2xtableyaml