Package: ieegio 0.0.2
ieegio: File IO for Intracranial Electroencephalography
Integrated toolbox supporting common file formats used for intracranial Electroencephalography (iEEG) and deep-brain stimulation (DBS) study.
Authors:
ieegio_0.0.2.tar.gz
ieegio_0.0.2.zip(r-4.5)ieegio_0.0.2.zip(r-4.4)ieegio_0.0.2.zip(r-4.3)
ieegio_0.0.2.tgz(r-4.4-any)ieegio_0.0.2.tgz(r-4.3-any)
ieegio_0.0.2.tar.gz(r-4.5-noble)ieegio_0.0.2.tar.gz(r-4.4-noble)
ieegio_0.0.2.tgz(r-4.4-emscripten)ieegio_0.0.2.tgz(r-4.3-emscripten)
ieegio.pdf |ieegio.html✨
ieegio/json (API)
NEWS
| # Install 'ieegio' in R: |
| install.packages('ieegio', repos = c('https://dipterix.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/dipterix/ieegio/issues
bci2000brainbrainvisiondbsedfelectrophysiologyephysfreesurferieegneuroimagingneuroscienceniftinwb-format
Last updated 21 days agofrom:0a972a2f23. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 19 2024 |
| R-4.5-win | OK | Nov 19 2024 |
| R-4.5-linux | OK | Nov 19 2024 |
| R-4.4-win | OK | Nov 19 2024 |
| R-4.4-mac | OK | Nov 19 2024 |
| R-4.3-win | OK | Nov 19 2024 |
| R-4.3-mac | OK | Nov 19 2024 |
Exports:ieegio_sample_datainstall_pynwbio_h5_namesio_h5_validio_read_fsio_read_fstio_read_giiio_read_h5io_read_iniio_read_jsonio_read_matio_read_mgzio_read_niiio_read_yamlio_write_fstio_write_giiio_write_h5io_write_jsonio_write_matio_write_mgzio_write_niiio_write_yamlpynwb_moduleread_bci2000read_brainvisread_edfread_nsxread_nwbread_surfaceread_volumewrite_surfacewrite_volume
Dependencies:abindbase64encBHbitbit64bitopsclicpp11crayoncurldata.tabledigestdownloaderevaluatefansifastmapfilearrayfreesurferformatsfsfstfstcoregiftigluehdf5rherehtmltoolsIRdisplayIRkerneljsonlitelatticelifecyclemagrittrMatrixoro.niftipbdZMQpillarpkgfilecachepngR.matlabR.methodsS3R.ooR.utilsR6rappdirsRcppRcppTOMLreadNSxreprreticulaterlangRNiftirprojrootrpyANTsrpymatrstudioapistringistringrutf8uuidvctrswithrxml2yaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Download sample files | ieegio_sample_data |
| Read and write surface files | imaging-surface io_read_fs io_read_gii io_write_gii read_surface write_surface |
| Read and write volume data | imaging-volume io_read_mgz io_read_nii io_write_mgz io_write_mgz.ants.core.ants_image.ANTsImage io_write_mgz.array io_write_mgz.ieegio_mgh io_write_mgz.ieegio_volume io_write_mgz.nifti io_write_mgz.niftiImage io_write_nii io_write_nii.ants.core.ants_image.ANTsImage io_write_nii.array io_write_nii.ieegio_mgh io_write_nii.ieegio_nifti io_write_nii.nifti io_write_nii.niftiImage read_volume write_volume |
| Check whether a 'HDF5' file can be opened for read/write | io_h5_names io_h5_valid |
| Lazy Load 'HDF5' File via 'hdf5r-package' | io_read_h5 |
| Save objects to 'HDF5' file without trivial checks | io_write_h5 |
| Lazy 'HDF5' file loader | LazyH5 |
| Low-level file read and write | io_read_fst io_read_ini io_read_json io_read_mat io_read_yaml io_write_fst io_write_json io_write_mat io_write_yaml low-level-read-write |
| Creates a 'NWBHDF5IO' file container | NWBHDF5IO |
| Plot '3D' surface objects | plot.ieegio_surface |
| Plot '3D' volume in anatomical slices | plot.ieegio_volume |
| Install ''NWB'' via ''pynwb'' | install_pynwb pynwb_module |
| Read 'BCI2000' data file | read_bci2000 |
| Read 'BrainVision' data | read_brainvis |
| Read 'EDF' or 'BDF' data file | read_edf |
| Read ('BlackRock') 'NEV' 'NSx' data | read_nsx |
| Read 'NWB' format | read_nwb |
| Class definition for signal cache | SignalDataCache |
