Package: ieegio 0.0.2

ieegio: File IO for Intracranial Electroencephalography

Integrated toolbox supporting common file formats used for intracranial Electroencephalography (iEEG) and deep-brain stimulation (DBS) study.

Authors:Zhengjia Wang [aut, cre]

ieegio_0.0.2.tar.gz
ieegio_0.0.2.zip(r-4.5)ieegio_0.0.2.zip(r-4.4)ieegio_0.0.2.zip(r-4.3)
ieegio_0.0.2.tgz(r-4.4-any)ieegio_0.0.2.tgz(r-4.3-any)
ieegio_0.0.2.tar.gz(r-4.5-noble)ieegio_0.0.2.tar.gz(r-4.4-noble)
ieegio_0.0.2.tgz(r-4.4-emscripten)ieegio_0.0.2.tgz(r-4.3-emscripten)
ieegio.pdf |ieegio.html
ieegio/json (API)
NEWS

# Install 'ieegio' in R:
install.packages('ieegio', repos = c('https://dipterix.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/dipterix/ieegio/issues

Pkgdown:https://dipterix.org

On CRAN:

bci2000brainbrainvisiondbsedfelectrophysiologyephysfreesurferieegneuroimagingneuroscienceniftinwb-format

4.70 score 10 scripts 415 downloads 32 exports 63 dependencies

Last updated 1 months agofrom:0a972a2f23. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 19 2024
R-4.5-winOKNov 19 2024
R-4.5-linuxOKNov 19 2024
R-4.4-winOKNov 19 2024
R-4.4-macOKNov 19 2024
R-4.3-winOKNov 19 2024
R-4.3-macOKNov 19 2024

Exports:ieegio_sample_datainstall_pynwbio_h5_namesio_h5_validio_read_fsio_read_fstio_read_giiio_read_h5io_read_iniio_read_jsonio_read_matio_read_mgzio_read_niiio_read_yamlio_write_fstio_write_giiio_write_h5io_write_jsonio_write_matio_write_mgzio_write_niiio_write_yamlpynwb_moduleread_bci2000read_brainvisread_edfread_nsxread_nwbread_surfaceread_volumewrite_surfacewrite_volume

Dependencies:abindbase64encBHbitbit64bitopsclicpp11crayoncurldata.tabledigestdownloaderevaluatefansifastmapfilearrayfreesurferformatsfsfstfstcoregiftigluehdf5rherehtmltoolsIRdisplayIRkerneljsonlitelatticelifecyclemagrittrMatrixoro.niftipbdZMQpillarpkgfilecachepngR.matlabR.methodsS3R.ooR.utilsR6rappdirsRcppRcppTOMLreadNSxreprreticulaterlangRNiftirprojrootrpyANTsrpymatrstudioapistringistringrutf8uuidvctrswithrxml2yaml

Read ephys data

Rendered fromread-ephys.Rmdusingknitr::rmarkdownon Nov 19 2024.

Last update: 2024-09-12
Started: 2024-09-12

Read imaging data

Rendered fromread-imaging-data.Rmdusingknitr::rmarkdownon Nov 19 2024.

Last update: 2024-09-12
Started: 2024-09-12

Readme and manuals

Help Manual

Help pageTopics
Download sample filesieegio_sample_data
Read and write surface filesimaging-surface io_read_fs io_read_gii io_write_gii read_surface write_surface
Read and write volume dataimaging-volume io_read_mgz io_read_nii io_write_mgz io_write_mgz.ants.core.ants_image.ANTsImage io_write_mgz.array io_write_mgz.ieegio_mgh io_write_mgz.ieegio_volume io_write_mgz.nifti io_write_mgz.niftiImage io_write_nii io_write_nii.ants.core.ants_image.ANTsImage io_write_nii.array io_write_nii.ieegio_mgh io_write_nii.ieegio_nifti io_write_nii.nifti io_write_nii.niftiImage read_volume write_volume
Check whether a 'HDF5' file can be opened for read/writeio_h5_names io_h5_valid
Lazy Load 'HDF5' File via 'hdf5r-package'io_read_h5
Save objects to 'HDF5' file without trivial checksio_write_h5
Lazy 'HDF5' file loaderLazyH5
Low-level file read and writeio_read_fst io_read_ini io_read_json io_read_mat io_read_yaml io_write_fst io_write_json io_write_mat io_write_yaml low-level-read-write
Creates a 'NWBHDF5IO' file containerNWBHDF5IO
Plot '3D' surface objectsplot.ieegio_surface
Plot '3D' volume in anatomical slicesplot.ieegio_volume
Install ''NWB'' via ''pynwb''install_pynwb pynwb_module
Read 'BCI2000' data fileread_bci2000
Read 'BrainVision' dataread_brainvis
Read 'EDF' or 'BDF' data fileread_edf
Read ('BlackRock') 'NEV' 'NSx' dataread_nsx
Read 'NWB' formatread_nwb
Class definition for signal cacheSignalDataCache