Changes in version 0.1.0 (2026-05-31)                  

  - Added burn_curve to burn electrode trajectories (e.g. depth/sEEG
    leads or DBS shafts) into a volume given start and end positions in
    image native RAS coordinates, with configurable radius and
    per-segment colors
  - Added a merge mode to burn_curve so newly burned trajectories can be
    composted onto an existing volume instead of overwriting it
  - Added a base R graphics plot method for ieegio_surface objects as an
    alternative to the default r3js rendering, useful for static figures
    and environments without WebGL
  - Fixed get_channel so channels can be looked up by label (in addition
    to index) for BCI2000 and BrainVision formats
  - Fixed mat_to_quaternion to correctly handle handedness changes,
    aligning the quaternion sign convention with FreeSurfer
  - Code style and lint cleanup across the package; rebuilt
    documentation

                 Changes in version 0.0.9 (2026-01-27)                  

  - Fixed CRAN check issues
  - Added volume and surface related functions as MCP tools (can be
    loaded via package ravepipeline and ellmer)

                 Changes in version 0.0.8 (2026-01-11)                  

  - Added new_space and as_ieegio_transform to define coordinate spaces
    and chain transforms
  - Added io_read_ants_transform to read ANTs affine and displacement
    field transforms
  - Added io_read_flirt_transform to read FSL FLIRT affine transforms
  - Added volume_to_surface and surface_to_surface for mapping data
    between volumes and surfaces
  - Fixed point transform ambiguity when chaining transforms with
    different interpretations
  - Improved plot.ieegio_volume intensity windowing using
    percentile-based display range (2-98 percentiles), following
    conventions from FSLeyes, AFNI, MRIcroGL, and SPM
  - Auto-detection for CT vs MRI data: excludes zeros by default but
    includes them when lower percentile is below -500 (indicating CT
    with -1024 background)
  - Statistical overlay detection: applies symmetric range for
    z-score-like data
  - Values outside display range are now clamped to boundary colors
    instead of rendering as transparent

                        Changes in version 0.0.7                        

  - Added as_nifti_header as a workaround when RNifti is missing (not
    installed or running in WebAssembly)
  - Added automatic checks when pushing commits the repository to Github

                 Changes in version 0.0.6 (2025-10-24)                  

  - Added write_edf to save signals as continuous EDF format
  - Added YBA atlas (690 segments) to example data
  - Improved HDF5 checking error messages

                 Changes in version 0.0.5 (2025-07-22)                  

  - Added LazyFST class
  - Fixed a bug where gzipped is ignored in io_write_nii.array
  - LazyH5 fall back to alternatives when HDF5 is not supported in wasm
  - Plotting surfaces use r3js by default
  - Fixed BrainVision annotation bugs
  - Supported writing to STL format (to support importing to BrainLab)
  - Added supports to read streamlines data (trk, tck, tt, vtk)
  - Writing to freesurfer surfaces also appends orientation information
    at the end.

                 Changes in version 0.0.4 (2025-03-07)                  

  - Added merge support for both volume and surface objects; for surface
    objects, users can choose whether to merge the objects in model or
    world space
  - Added dependency ravetools to help speed up sample volumes using C++
  - Fixed missing transform issue in writing to GIfTI format
  - Fixed write_surface not working when writing to FreeSurfer
    measurement (curvature) format
  - Fixed a typo that caused setting volume data resulting in errors
  - as_ieegio_surface does not require vertices

                 Changes in version 0.0.3 (2025-01-13)                  

  - Cleaned h5py loader
  - mat_to_quaternion always returns non-negative w now
  - Added generics dim and length to volume object
  - Fixed annotation issues in EDF format
  - Time selection is double-sided using greater equal and less equal
    signs
  - Added more sample data
  - Supports colored (RGB[A]) formats
  - Fixed color intensity when cal_min and cal_max is set
  - Using r3js for visualizing surfaces
  - Added resample_volume to sample images (currently only nearest
    neighbor)
  - Added burn_volume to burn contacts (positions given in the image
    native RAS coordinate) with any given colors
  - Fixed io_h5_names returning wrong names when using with h5py
  - Exported internal class LazyH5 for down-stream packages
  - Added as_ieegio_volume and as_ieegio_surface to enclose volume or
    surface data
  - Added a flag to disable using Python

                 Changes in version 0.0.2 (2024-10-31)                  

  - Added h5py as an alternative back-end support
  - Fixed a bug where images are not loaded correctly due to image
    format being ignored
  - Fixed Torig (index to tkr coordinate transform) issue
  - Fixed a global variable issue
  - Fixed a bug where file name is not respected

                 Changes in version 0.0.1 (2024-09-16)                  

  - Initial CRAN submission.